Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Gm13342-201ENSMUST00000121055 207 ntBASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Gm27682-201ENSMUST00000183930 110 ntBASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Gm5781-201ENSMUST00000219792 443 ntBASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trbv29A0A0G2LB96 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Gm23912-201ENSMUST00000104687 87 ntBASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Gm12138-201ENSMUST00000122180 951 ntBASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Gm27839-201ENSMUST00000184242 106 ntBASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trbv29A0A0G2LB96 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms