Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.98□□□□□ -0.81
Trav18A0A075B656 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.97□□□□□ -0.81
Trav18A0A075B656 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.97□□□□□ -0.81
Trav18A0A075B656 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.97□□□□□ -0.81
Trav18A0A075B656 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.97□□□□□ -0.81
Trav18A0A075B656 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.97□□□□□ -0.81
Trav18A0A075B656 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.97□□□□□ -0.81
Trav18A0A075B656 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.97□□□□□ -0.81
Trav18A0A075B656 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav18A0A075B656 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Trav18A0A075B656 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.96□□□□□ -0.81
Trav18A0A075B656 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
Trav18A0A075B656 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav18A0A075B656 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.96□□□□□ -0.81
Trav18A0A075B656 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.96□□□□□ -0.82
Trav18A0A075B656 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.96□□□□□ -0.82
Trav18A0A075B656 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms