Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.65□□□□□ -0.38
Speer3W4VSP1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Gm37517-201ENSMUST00000194004 1289 ntBASIC12.65□□□□□ -0.38
Speer3W4VSP1 Gm38250-202ENSMUST00000195108 462 ntTSL 3 BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Gm37922-201ENSMUST00000195596 455 ntBASIC12.65□□□□□ -0.38
Speer3W4VSP1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.65□□□□□ -0.38
Speer3W4VSP1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.65□□□□□ -0.38
Speer3W4VSP1 CT025538.2-201ENSMUST00000226083 772 ntBASIC12.65□□□□□ -0.38
Speer3W4VSP1 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Speer3W4VSP1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Speer3W4VSP1 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Speer3W4VSP1 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.64□□□□□ -0.39
Speer3W4VSP1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.64□□□□□ -0.39
Speer3W4VSP1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Gm37490-201ENSMUST00000195566 724 ntBASIC12.64□□□□□ -0.39
Speer3W4VSP1 Gm42433-201ENSMUST00000196806 940 ntBASIC12.64□□□□□ -0.39
Speer3W4VSP1 Gm29755-201ENSMUST00000196976 948 ntBASIC12.64□□□□□ -0.39
Speer3W4VSP1 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.64□□□□□ -0.39
Speer3W4VSP1 Gm43761-201ENSMUST00000202132 991 ntBASIC12.64□□□□□ -0.39
Speer3W4VSP1 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.64□□□□□ -0.39
Speer3W4VSP1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Speer3W4VSP1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms