Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm12138-201ENSMUST00000122180 951 ntBASIC9.38□□□□□ -0.91
PdfS4R2K0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.38□□□□□ -0.91
PdfS4R2K0 Gm9630-201ENSMUST00000178304 885 ntBASIC9.38□□□□□ -0.91
PdfS4R2K0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Gm7287-201ENSMUST00000205267 602 ntBASIC9.38□□□□□ -0.91
PdfS4R2K0 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.38□□□□□ -0.91
PdfS4R2K0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
PdfS4R2K0 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.38□□□□□ -0.91
PdfS4R2K0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.38□□□□□ -0.91
PdfS4R2K0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
PdfS4R2K0 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PdfS4R2K0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.38□□□□□ -0.91
PdfS4R2K0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PdfS4R2K0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Gm12928-201ENSMUST00000117115 573 ntBASIC9.37□□□□□ -0.91
PdfS4R2K0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.37□□□□□ -0.91
PdfS4R2K0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Gm17150-201ENSMUST00000165577 381 ntBASIC9.37□□□□□ -0.91
PdfS4R2K0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Gm6244-201ENSMUST00000178732 841 ntBASIC9.37□□□□□ -0.91
PdfS4R2K0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.37□□□□□ -0.91
PdfS4R2K0 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.37□□□□□ -0.91
PdfS4R2K0 Gm18473-201ENSMUST00000220543 868 ntBASIC9.37□□□□□ -0.91
PdfS4R2K0 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.37□□□□□ -0.91
PdfS4R2K0 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.37□□□□□ -0.91
PdfS4R2K0 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.37□□□□□ -0.91
PdfS4R2K0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
PdfS4R2K0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PdfS4R2K0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.36□□□□□ -0.91
PdfS4R2K0 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.36□□□□□ -0.91
PdfS4R2K0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
PdfS4R2K0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.36□□□□□ -0.91
PdfS4R2K0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.36□□□□□ -0.91
PdfS4R2K0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
PdfS4R2K0 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC9.36□□□□□ -0.91
PdfS4R2K0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PdfS4R2K0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.36□□□□□ -0.91
PdfS4R2K0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
PdfS4R2K0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms