Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Gm18935-201ENSMUST00000212692 664 ntBASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Gm7046-201ENSMUST00000221351 977 ntBASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Gm7399-201ENSMUST00000032395 858 ntBASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
ClcnkaQ9WUB7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm4986-201ENSMUST00000119731 549 ntBASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm27501-201ENSMUST00000183599 107 ntBASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm43630-201ENSMUST00000201550 776 ntBASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Morn2-202ENSMUST00000227729 656 ntBASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClcnkaQ9WUB7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Gm13297-201ENSMUST00000120205 934 ntBASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.25□□□□□ -0.61
ClcnkaQ9WUB7 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms