Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubd1Q9R1K7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
Tubd1Q9R1K7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
Tubd1Q9R1K7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Tubd1Q9R1K7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tubd1Q9R1K7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tubd1Q9R1K7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Tubd1Q9R1K7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Gm6114-201ENSMUST00000182472 968 ntBASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Gm8343-201ENSMUST00000182705 994 ntBASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Pck2-205ENSMUST00000226352 2784 ntBASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubd1Q9R1K7 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Gm14130-201ENSMUST00000118417 987 ntBASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Gm5705-201ENSMUST00000066241 711 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms