Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Mir1247-201ENSMUST00000116706 82 ntBASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm6007-201ENSMUST00000208170 823 ntBASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clcn2Q9R0A1 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.46□□□□□ -0.41
Clcn2Q9R0A1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms