Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Gm13665-201ENSMUST00000120830 528 ntBASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Gm14832-201ENSMUST00000121289 322 ntBASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Gm2383-201ENSMUST00000181461 807 ntBASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Gm10076-201ENSMUST00000073238 384 ntBASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Gm44967-201ENSMUST00000207047 631 ntBASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Mir433-201ENSMUST00000093564 124 ntBASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clcf1Q9QZM3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms