Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm24990-201ENSMUST00000157406 323 ntBASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Gm43962-201ENSMUST00000203898 190 ntBASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Gm5455-201ENSMUST00000058710 715 ntBASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf3Q9QXK7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 AY036118-201ENSMUST00000200021 923 ntBASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.09□□□□□ -0.31
Cpsf3Q9QXK7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cpsf3Q9QXK7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cpsf3Q9QXK7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Cpsf3Q9QXK7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm29615-201ENSMUST00000185371 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm28224-201ENSMUST00000186078 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm29001-201ENSMUST00000186177 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm28292-201ENSMUST00000186593 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm28101-201ENSMUST00000187608 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm29076-201ENSMUST00000187689 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm28302-201ENSMUST00000187931 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm28646-201ENSMUST00000188220 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm28205-201ENSMUST00000189177 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm29032-201ENSMUST00000189797 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm28695-201ENSMUST00000190300 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm37448-201ENSMUST00000192795 697 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf3Q9QXK7 Gm8385-201ENSMUST00000058999 643 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms