Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Zcchc17Q9ESX4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zcchc17Q9ESX4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.4□□□□□ -0.1
Zcchc17Q9ESX4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zcchc17Q9ESX4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zcchc17Q9ESX4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Gm22144-201ENSMUST00000157402 102 ntBASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Gm8492-201ENSMUST00000182375 987 ntBASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc17Q9ESX4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Gm25072-201ENSMUST00000175233 235 ntBASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Gm42518-201ENSMUST00000196277 938 ntBASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Gm4607-201ENSMUST00000206649 577 ntBASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Gm2517-201ENSMUST00000215651 348 ntBASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc17Q9ESX4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Gm11509-201ENSMUST00000117358 325 ntBASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Gm11340-201ENSMUST00000119226 412 ntBASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc17Q9ESX4 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms