Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Gm14057-201ENSMUST00000120631 482 ntBASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Gm7730-201ENSMUST00000212486 454 ntBASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.43□□□□□ -0.58
Hmgn3Q9DCB1 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Gm16215-201ENSMUST00000161990 637 ntBASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms