Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx56Q9D0R4 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Map1b-203ENSMUST00000223725 2669 ntBASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Gm15547-201ENSMUST00000122152 333 ntBASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Gm43630-201ENSMUST00000201550 776 ntBASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Gm8712-201ENSMUST00000221090 701 ntBASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx56Q9D0R4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Gm14726-201ENSMUST00000120623 896 ntBASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Gm6334-201ENSMUST00000207083 228 ntBASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Gm21769-201ENSMUST00000211922 111 ntBASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Gm19994-201ENSMUST00000217086 586 ntBASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms