Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1aQ9CU62 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1aQ9CU62 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smc1aQ9CU62 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.69□□□□□ -0.22
Smc1aQ9CU62 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1aQ9CU62 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1aQ9CU62 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1aQ9CU62 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1aQ9CU62 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1aQ9CU62 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.69□□□□□ -0.22
Smc1aQ9CU62 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.69□□□□□ -0.22
Smc1aQ9CU62 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.68□□□□□ -0.22
Smc1aQ9CU62 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm16505-201ENSMUST00000179981 232 ntBASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.68□□□□□ -0.22
Smc1aQ9CU62 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1aQ9CU62 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Gm14017-201ENSMUST00000121934 386 ntBASIC13.67□□□□□ -0.22
Smc1aQ9CU62 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Gm43138-201ENSMUST00000199123 708 ntBASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Smc1aQ9CU62 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1aQ9CU62 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1aQ9CU62 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1aQ9CU62 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1aQ9CU62 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1aQ9CU62 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms