Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm24231-201ENSMUST00000104315 133 ntBASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm13736-201ENSMUST00000119272 253 ntBASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm13315-201ENSMUST00000120376 991 ntBASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm29396-201ENSMUST00000185659 716 ntBASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm38117-201ENSMUST00000194653 939 ntBASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 AC173482.3-201ENSMUST00000225492 1212 ntBASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg3Q9CQV4 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm43341-201ENSMUST00000200104 1308 ntBASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm11342-203ENSMUST00000224879 1324 ntBASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm13875-201ENSMUST00000120162 282 ntBASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm23884-201ENSMUST00000122687 294 ntBASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm8018-201ENSMUST00000173536 789 ntBASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm43596-201ENSMUST00000202818 884 ntBASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm18329-201ENSMUST00000215832 589 ntBASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm42736-201ENSMUST00000200723 1353 ntBASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms