Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.9□□□□□ -0.19
Trim11Q99PQ2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm37424-201ENSMUST00000191727 561 ntBASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm18062-201ENSMUST00000208020 547 ntBASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm18055-201ENSMUST00000208254 547 ntBASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm19309-201ENSMUST00000218295 205 ntBASIC13.89□□□□□ -0.19
Trim11Q99PQ2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim11Q99PQ2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.88□□□□□ -0.19
Trim11Q99PQ2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim11Q99PQ2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim11Q99PQ2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms