Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.95□□□□□ -0.5
Trim16Q99PP9 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.95□□□□□ -0.5
Trim16Q99PP9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trim16Q99PP9 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.95□□□□□ -0.5
Trim16Q99PP9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Gm9899-201ENSMUST00000065519 555 ntBASIC11.95□□□□□ -0.5
Trim16Q99PP9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.95□□□□□ -0.5
Trim16Q99PP9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim16Q99PP9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.94□□□□□ -0.5
Trim16Q99PP9 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Gm15703-201ENSMUST00000120250 880 ntBASIC11.94□□□□□ -0.5
Trim16Q99PP9 Gm11964-201ENSMUST00000120982 444 ntBASIC11.94□□□□□ -0.5
Trim16Q99PP9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Gm22058-201ENSMUST00000083393 310 ntBASIC11.94□□□□□ -0.5
Trim16Q99PP9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.94□□□□□ -0.5
Trim16Q99PP9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.94□□□□□ -0.5
Trim16Q99PP9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.94□□□□□ -0.5
Trim16Q99PP9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim16Q99PP9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Mir1247-201ENSMUST00000116706 82 ntBASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gm13316-201ENSMUST00000140537 691 ntBASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gm42627-201ENSMUST00000197347 224 ntBASIC11.93□□□□□ -0.5
Trim16Q99PP9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms