Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkd1Q99MH6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkd1Q99MH6 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.49□□□□□ -0.57
Nkd1Q99MH6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Nkd1Q99MH6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkd1Q99MH6 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkd1Q99MH6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkd1Q99MH6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkd1Q99MH6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkd1Q99MH6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkd1Q99MH6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkd1Q99MH6 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.49□□□□□ -0.57
Nkd1Q99MH6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Gm44405-201ENSMUST00000198952 126 ntBASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Gm40466-201ENSMUST00000212174 422 ntBASIC11.48□□□□□ -0.57
Nkd1Q99MH6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Rgr-203ENSMUST00000225070 4704 ntBASIC11.48□□□□□ -0.57
Nkd1Q99MH6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Gm9083-201ENSMUST00000120423 819 ntBASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nkd1Q99MH6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms