Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Gm13829-201ENSMUST00000119600 138 ntBASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Snora78-201ENSMUST00000158630 128 ntBASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Gm5186-201ENSMUST00000218781 920 ntBASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cstf3Q99LI7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Gm14999-201ENSMUST00000121039 624 ntBASIC11.79□□□□□ -0.52
Cstf3Q99LI7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Gm5370-201ENSMUST00000187187 574 ntBASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Gm37008-201ENSMUST00000195712 319 ntBASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cstf3Q99LI7 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms