Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lims1Q99JW4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.11□□□□□ -0.63
Lims1Q99JW4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Gm24934-201ENSMUST00000103764 111 ntBASIC11.11□□□□□ -0.63
Lims1Q99JW4 Gm14247-201ENSMUST00000120950 237 ntBASIC11.11□□□□□ -0.63
Lims1Q99JW4 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.11□□□□□ -0.63
Lims1Q99JW4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Gm24548-201ENSMUST00000158650 108 ntBASIC11.11□□□□□ -0.63
Lims1Q99JW4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.11□□□□□ -0.63
Lims1Q99JW4 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.11□□□□□ -0.63
Lims1Q99JW4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Snora73a-201ENSMUST00000082453 205 ntBASIC11.11□□□□□ -0.63
Lims1Q99JW4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lims1Q99JW4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.1□□□□□ -0.63
Lims1Q99JW4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.1□□□□□ -0.63
Lims1Q99JW4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Gm25261-201ENSMUST00000157416 134 ntBASIC11.1□□□□□ -0.63
Lims1Q99JW4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Gm45784-201ENSMUST00000188360 142 ntBASIC11.1□□□□□ -0.63
Lims1Q99JW4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.1□□□□□ -0.63
Lims1Q99JW4 Gm45331-201ENSMUST00000209868 554 ntBASIC11.1□□□□□ -0.63
Lims1Q99JW4 Gm40466-201ENSMUST00000212174 422 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms