Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.11□□□□□ -0.15
Smc1bQ920F6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Gm8285-201ENSMUST00000208293 759 ntBASIC14.11□□□□□ -0.15
Smc1bQ920F6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.11□□□□□ -0.15
Smc1bQ920F6 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.11□□□□□ -0.15
Smc1bQ920F6 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smc1bQ920F6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Gm12015-201ENSMUST00000117065 843 ntBASIC14.1□□□□□ -0.15
Smc1bQ920F6 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.1□□□□□ -0.15
Smc1bQ920F6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.1□□□□□ -0.15
Smc1bQ920F6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.1□□□□□ -0.15
Smc1bQ920F6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smc1bQ920F6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smc1bQ920F6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm15432-201ENSMUST00000121106 195 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm29615-201ENSMUST00000185371 697 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm28224-201ENSMUST00000186078 697 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm29001-201ENSMUST00000186177 697 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm28292-201ENSMUST00000186593 697 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm28101-201ENSMUST00000187608 697 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms