Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm14726-201ENSMUST00000120623 896 ntBASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm2991-201ENSMUST00000173338 480 ntBASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm10312-201ENSMUST00000078515 489 ntBASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb1Q91Y08 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb1Q91Y08 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhb1Q91Y08 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhb1Q91Y08 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhb1Q91Y08 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhb1Q91Y08 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Pcdhb1Q91Y08 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
Pcdhb1Q91Y08 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms