Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gm13408-201ENSMUST00000119822 798 ntBASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gm13935-201ENSMUST00000121859 798 ntBASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Mir7677-201ENSMUST00000184226 67 ntBASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gm43962-201ENSMUST00000203898 190 ntBASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.77□□□□□ -0.36
Pcdhb18Q91Y02 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Gm15515-201ENSMUST00000117827 822 ntBASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Gm15432-201ENSMUST00000121106 195 ntBASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Gm7467-201ENSMUST00000185173 652 ntBASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Gm37835-201ENSMUST00000193305 361 ntBASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Gm9555-201ENSMUST00000200908 583 ntBASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Gm17827-201ENSMUST00000211825 742 ntBASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Ntng1-201ENSMUST00000051253 327 ntBASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb18Q91Y02 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb18Q91Y02 Gm14058-201ENSMUST00000116082 735 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms