Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm14612-201ENSMUST00000121522 881 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm12634-201ENSMUST00000122157 992 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm25261-201ENSMUST00000157416 134 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm15795-201ENSMUST00000160969 553 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm5946-201ENSMUST00000182340 970 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm43693-201ENSMUST00000196072 1249 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm6013-201ENSMUST00000212264 699 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm19309-201ENSMUST00000218295 205 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 AC105169.1-201ENSMUST00000218912 1294 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Lilrb4a-215ENSMUST00000220182 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm13731-201ENSMUST00000117332 196 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm15154-201ENSMUST00000117590 366 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm15780-201ENSMUST00000121283 935 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm20776-201ENSMUST00000189940 700 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm38002-201ENSMUST00000193255 180 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm2429-201ENSMUST00000194635 586 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm42627-201ENSMUST00000197347 224 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm43895-201ENSMUST00000203219 855 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 AC154585.1-201ENSMUST00000218917 997 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 AC117656.3-205ENSMUST00000224606 1205 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Gm24035-201ENSMUST00000082867 107 ntBASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb20Q91XZ9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms