Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.11□□□□□ -0.47
Usb1Q91W78 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Usb1Q91W78 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Usb1Q91W78 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.11□□□□□ -0.47
Usb1Q91W78 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.11□□□□□ -0.47
Usb1Q91W78 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.11□□□□□ -0.47
Usb1Q91W78 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Usb1Q91W78 Gm30285-201ENSMUST00000214614 422 ntBASIC12.11□□□□□ -0.47
Usb1Q91W78 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.11□□□□□ -0.47
Usb1Q91W78 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usb1Q91W78 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Usb1Q91W78 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.1□□□□□ -0.47
Usb1Q91W78 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Mir877-201ENSMUST00000104738 85 ntBASIC12.1□□□□□ -0.47
Usb1Q91W78 Rmrp-201ENSMUST00000157463 271 ntBASIC12.1□□□□□ -0.47
Usb1Q91W78 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm8018-201ENSMUST00000173536 789 ntBASIC12.1□□□□□ -0.47
Usb1Q91W78 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm2546-201ENSMUST00000182630 991 ntBASIC12.1□□□□□ -0.47
Usb1Q91W78 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm4857-201ENSMUST00000192718 785 ntBASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm31256-201ENSMUST00000194705 506 ntBASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm44405-201ENSMUST00000198952 126 ntBASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.1□□□□□ -0.47
Usb1Q91W78 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.1□□□□□ -0.47
Usb1Q91W78 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.1□□□□□ -0.47
Usb1Q91W78 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.1□□□□□ -0.47
Usb1Q91W78 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Usb1Q91W78 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Usb1Q91W78 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usb1Q91W78 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Usb1Q91W78 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.09□□□□□ -0.47
Usb1Q91W78 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Usb1Q91W78 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.09□□□□□ -0.47
Usb1Q91W78 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Usb1Q91W78 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms