Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr1Q8VHP6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cdhr1Q8VHP6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr1Q8VHP6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr1Q8VHP6 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr1Q8VHP6 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr1Q8VHP6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Gm12380-201ENSMUST00000119012 544 ntBASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Gm12266-201ENSMUST00000120311 962 ntBASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Mir3547-201ENSMUST00000175461 88 ntBASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr1Q8VHP6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Gm11331-201ENSMUST00000119764 288 ntBASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Gm5616-201ENSMUST00000165252 384 ntBASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Gm8741-201ENSMUST00000174736 384 ntBASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Gm43378-201ENSMUST00000199336 582 ntBASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Gm26035-201ENSMUST00000083065 308 ntBASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr1Q8VHP6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12□□□□□ -0.49
Cdhr1Q8VHP6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdhr1Q8VHP6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr1Q8VHP6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr1Q8VHP6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr1Q8VHP6 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.99□□□□□ -0.49
Cdhr1Q8VHP6 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdhr1Q8VHP6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr1Q8VHP6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr1Q8VHP6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdhr1Q8VHP6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr1Q8VHP6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms