Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rprd1aQ8VDS4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rprd1aQ8VDS4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rprd1aQ8VDS4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rprd1aQ8VDS4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rprd1aQ8VDS4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Rprd1aQ8VDS4 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.59□□□□□ -0.39
Rprd1aQ8VDS4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rprd1aQ8VDS4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rprd1aQ8VDS4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rprd1aQ8VDS4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Rprd1aQ8VDS4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.58□□□□□ -0.39
Rprd1aQ8VDS4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rprd1aQ8VDS4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm14644-201ENSMUST00000116671 647 ntBASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm26361-201ENSMUST00000158868 186 ntBASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm9230-201ENSMUST00000188228 532 ntBASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm44882-201ENSMUST00000205702 802 ntBASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.58□□□□□ -0.4
Rprd1aQ8VDS4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Gm19187-201ENSMUST00000206781 892 ntBASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Gm45598-202ENSMUST00000210719 986 ntBASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rprd1aQ8VDS4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms