Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpap2Q8VC34 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpap2Q8VC34 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.37□□□□□ -0.27
Rpap2Q8VC34 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpap2Q8VC34 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpap2Q8VC34 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpap2Q8VC34 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpap2Q8VC34 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rpap2Q8VC34 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.37□□□□□ -0.27
Rpap2Q8VC34 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpap2Q8VC34 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Cog3-203ENSMUST00000227473 4197 ntBASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Gm13350-201ENSMUST00000120519 479 ntBASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Gm7584-201ENSMUST00000175829 940 ntBASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Gm5706-201ENSMUST00000181525 993 ntBASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Gm38317-201ENSMUST00000195564 343 ntBASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Rprl1-202ENSMUST00000198476 238 ntBASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.36□□□□□ -0.27
Rpap2Q8VC34 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpap2Q8VC34 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Map1b-203ENSMUST00000223725 2669 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Gm7722-201ENSMUST00000120646 741 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Gm12164-201ENSMUST00000121695 551 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Gm15276-201ENSMUST00000145953 498 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Gm32999-201ENSMUST00000192693 562 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 AA914427-201ENSMUST00000193194 1166 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Gm45598-202ENSMUST00000210719 986 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpap2Q8VC34 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms