Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm12419-201ENSMUST00000116649 636 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm28937-201ENSMUST00000185413 695 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm29400-201ENSMUST00000187208 695 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm28662-201ENSMUST00000188446 695 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm28251-201ENSMUST00000188835 695 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm37318-201ENSMUST00000194325 695 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm38017-201ENSMUST00000194768 695 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm37287-201ENSMUST00000195449 695 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm34023-201ENSMUST00000195539 217 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm37793-201ENSMUST00000195548 695 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 CT485606.1-201ENSMUST00000213187 878 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm44758-201ENSMUST00000206096 2068 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 Mir1956-201ENSMUST00000157748 65 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Mir6958-201ENSMUST00000184207 73 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm6450-201ENSMUST00000200896 574 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd109Q8R422 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cd109Q8R422 Gm5879-201ENSMUST00000089501 1209 ntBASIC17.13■□□□□ 0.33
Cd109Q8R422 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cd109Q8R422 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cd109Q8R422 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC17.12■□□□□ 0.33
Cd109Q8R422 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cd109Q8R422 Gm11783-201ENSMUST00000119549 885 ntBASIC17.12■□□□□ 0.33
Cd109Q8R422 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Gm8459-201ENSMUST00000162504 760 ntBASIC17.12■□□□□ 0.33
Cd109Q8R422 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd109Q8R422 Gm28388-201ENSMUST00000186262 437 ntBASIC17.12■□□□□ 0.33
Cd109Q8R422 Gm3551-201ENSMUST00000190750 664 ntBASIC17.12■□□□□ 0.33
Cd109Q8R422 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cd109Q8R422 Gm9645-201ENSMUST00000197131 792 ntBASIC17.12■□□□□ 0.33
Cd109Q8R422 Gm43058-201ENSMUST00000197645 625 ntBASIC17.12■□□□□ 0.33
Cd109Q8R422 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd109Q8R422 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC17.12■□□□□ 0.33
Cd109Q8R422 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
Cd109Q8R422 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd109Q8R422 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd109Q8R422 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Gm14132-201ENSMUST00000117188 1719 ntBASIC17.11■□□□□ 0.33
Cd109Q8R422 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC17.11■□□□□ 0.33
Cd109Q8R422 Gm15172-201ENSMUST00000118945 1046 ntBASIC17.11■□□□□ 0.33
Cd109Q8R422 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd109Q8R422 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd109Q8R422 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Cd109Q8R422 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Cd109Q8R422 Gm18159-201ENSMUST00000174516 1070 ntBASIC17.11■□□□□ 0.33
Cd109Q8R422 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cd109Q8R422 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms