Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.48□□□□□ -0.41
CopaQ8CIE6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gm12058-201ENSMUST00000118614 437 ntBASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.48□□□□□ -0.41
CopaQ8CIE6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.48□□□□□ -0.41
CopaQ8CIE6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gm27390-201ENSMUST00000184516 176 ntBASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gm38317-201ENSMUST00000195564 343 ntBASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gm44405-201ENSMUST00000198952 126 ntBASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.48□□□□□ -0.41
CopaQ8CIE6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.48□□□□□ -0.41
CopaQ8CIE6 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.48□□□□□ -0.41
CopaQ8CIE6 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.48□□□□□ -0.41
CopaQ8CIE6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopaQ8CIE6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm11930-201ENSMUST00000117788 190 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm13736-201ENSMUST00000119272 253 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm25043-201ENSMUST00000158604 212 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm16296-201ENSMUST00000159905 325 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm26461-201ENSMUST00000175064 290 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm13097-201ENSMUST00000210722 397 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm45925-201ENSMUST00000218882 744 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.47□□□□□ -0.41
CopaQ8CIE6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopaQ8CIE6 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms