Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Gm27243-201ENSMUST00000183964 521 ntBASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Gm4768-201ENSMUST00000206199 686 ntBASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Snora73a-201ENSMUST00000082453 205 ntBASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc87Q8CDL9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc87Q8CDL9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms