Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm24830-201ENSMUST00000102024 166 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm11531-201ENSMUST00000117614 555 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm14921-201ENSMUST00000118643 908 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SynpoQ8CC35 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm25890-201ENSMUST00000177643 165 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm22614-201ENSMUST00000178300 165 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm18827-201ENSMUST00000188341 790 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm44124-201ENSMUST00000204159 472 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm45925-201ENSMUST00000218882 744 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm22042-201ENSMUST00000082989 165 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm26232-201ENSMUST00000083360 166 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm24136-201ENSMUST00000083374 165 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm26110-201ENSMUST00000083971 165 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Daam2-202ENSMUST00000224595 1926 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.83□□□□□ -0.52
SynpoQ8CC35 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynpoQ8CC35 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.82□□□□□ -0.52
SynpoQ8CC35 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.82□□□□□ -0.52
SynpoQ8CC35 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.82□□□□□ -0.52
SynpoQ8CC35 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm38092-201ENSMUST00000195600 653 ntBASIC11.82□□□□□ -0.52
SynpoQ8CC35 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.82□□□□□ -0.52
SynpoQ8CC35 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm13097-201ENSMUST00000210722 397 ntBASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm5363-201ENSMUST00000211927 938 ntBASIC11.82□□□□□ -0.52
SynpoQ8CC35 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.82□□□□□ -0.52
SynpoQ8CC35 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.82□□□□□ -0.52
SynpoQ8CC35 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.82□□□□□ -0.52
SynpoQ8CC35 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynpoQ8CC35 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms