Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Gm5706-201ENSMUST00000181525 993 ntBASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.43□□□□□ -0.26
Trim9Q8C7M3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Gm9899-201ENSMUST00000065519 555 ntBASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim9Q8C7M3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Gm7722-201ENSMUST00000120646 741 ntBASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Gm9230-201ENSMUST00000188228 532 ntBASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Gm38266-201ENSMUST00000194931 421 ntBASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms