Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Gm5700-201ENSMUST00000191483 989 ntBASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cfap54Q8C6S9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Cfap54Q8C6S9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Cfap54Q8C6S9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Cfap54Q8C6S9 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.4□□□□□ -0.59
Cfap54Q8C6S9 Gm24809-201ENSMUST00000175318 271 ntBASIC11.4□□□□□ -0.59
Cfap54Q8C6S9 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.59
Cfap54Q8C6S9 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.4□□□□□ -0.59
Cfap54Q8C6S9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Gm16305-201ENSMUST00000140747 556 ntBASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 BC106175-202ENSMUST00000219344 1213 ntBASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Gm11660-201ENSMUST00000120955 412 ntBASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Gm24328-201ENSMUST00000175104 67 ntBASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Gm34379-201ENSMUST00000195036 290 ntBASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Gm8956-201ENSMUST00000203939 825 ntBASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cfap54Q8C6S9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Gm11619-201ENSMUST00000117474 237 ntBASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Gm8451-201ENSMUST00000170338 447 ntBASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Gm29763-201ENSMUST00000205306 616 ntBASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cfap54Q8C6S9 Gm30671-201ENSMUST00000214898 318 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms