Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Gm38671-201ENSMUST00000200573 130 ntBASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tsen54Q8C2A2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Gm13813-201ENSMUST00000120998 787 ntBASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Gm6152-201ENSMUST00000151704 340 ntBASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms