Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Gm15003-201ENSMUST00000118884 446 ntBASIC16.09■□□□□ 0.17
Cps1Q8C196 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC16.09■□□□□ 0.17
Cps1Q8C196 Gm17070-201ENSMUST00000170463 784 ntBASIC16.09■□□□□ 0.17
Cps1Q8C196 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Gm28833-201ENSMUST00000189671 559 ntBASIC16.09■□□□□ 0.17
Cps1Q8C196 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC16.09■□□□□ 0.17
Cps1Q8C196 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cps1Q8C196 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cps1Q8C196 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cps1Q8C196 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cps1Q8C196 Adra1a-206ENSMUST00000225182 2337 ntBASIC16.08■□□□□ 0.17
Cps1Q8C196 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cps1Q8C196 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Cps1Q8C196 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cps1Q8C196 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cps1Q8C196 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cps1Q8C196 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Cps1Q8C196 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cps1Q8C196 Gm5434-202ENSMUST00000222384 1451 ntBASIC16.08■□□□□ 0.16
Cps1Q8C196 Gm5434-201ENSMUST00000071825 1451 ntBASIC16.08■□□□□ 0.16
Cps1Q8C196 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cps1Q8C196 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cps1Q8C196 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cps1Q8C196 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cps1Q8C196 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC16.08■□□□□ 0.16
Cps1Q8C196 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cps1Q8C196 Gm14270-201ENSMUST00000118388 846 ntBASIC16.08■□□□□ 0.16
Cps1Q8C196 Gm11979-201ENSMUST00000119629 743 ntBASIC16.08■□□□□ 0.16
Cps1Q8C196 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cps1Q8C196 Gm15549-201ENSMUST00000121595 622 ntBASIC16.08■□□□□ 0.16
Cps1Q8C196 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC16.08■□□□□ 0.16
Cps1Q8C196 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC16.08■□□□□ 0.16
Cps1Q8C196 Gm25554-201ENSMUST00000158075 113 ntBASIC16.08■□□□□ 0.16
Cps1Q8C196 Gm24809-201ENSMUST00000175318 271 ntBASIC16.08■□□□□ 0.16
Cps1Q8C196 Gm7902-201ENSMUST00000198842 947 ntBASIC16.08■□□□□ 0.16
Cps1Q8C196 Gm5996-201ENSMUST00000211110 718 ntBASIC16.08■□□□□ 0.16
Cps1Q8C196 AC153962.2-201ENSMUST00000219417 550 ntBASIC16.08■□□□□ 0.16
Cps1Q8C196 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cps1Q8C196 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Cps1Q8C196 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cps1Q8C196 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cps1Q8C196 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cps1Q8C196 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cps1Q8C196 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC16.07■□□□□ 0.16
Cps1Q8C196 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cps1Q8C196 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cps1Q8C196 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Cps1Q8C196 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.07■□□□□ 0.16
Cps1Q8C196 Gm11960-201ENSMUST00000122068 925 ntBASIC16.07■□□□□ 0.16
Cps1Q8C196 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC16.07■□□□□ 0.16
Cps1Q8C196 Gm20414-201ENSMUST00000172918 646 ntBASIC16.07■□□□□ 0.16
Cps1Q8C196 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cps1Q8C196 Gm26982-201ENSMUST00000182250 1151 ntBASIC16.07■□□□□ 0.16
Cps1Q8C196 Gm9081-201ENSMUST00000182346 991 ntBASIC16.07■□□□□ 0.16
Cps1Q8C196 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC16.07■□□□□ 0.16
Cps1Q8C196 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC16.07■□□□□ 0.16
Cps1Q8C196 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cps1Q8C196 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cps1Q8C196 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Cps1Q8C196 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cps1Q8C196 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cps1Q8C196 Gm9415-201ENSMUST00000200462 1321 ntBASIC16.07■□□□□ 0.16
Cps1Q8C196 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cps1Q8C196 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cps1Q8C196 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cps1Q8C196 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cps1Q8C196 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cps1Q8C196 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC16.06■□□□□ 0.16
Cps1Q8C196 Gm4895-201ENSMUST00000181646 1137 ntBASIC16.06■□□□□ 0.16
Cps1Q8C196 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Cps1Q8C196 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC16.06■□□□□ 0.16
Cps1Q8C196 Gm19640-201ENSMUST00000214849 464 ntBASIC16.06■□□□□ 0.16
Cps1Q8C196 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Cps1Q8C196 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Cps1Q8C196 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.06■□□□□ 0.16
Cps1Q8C196 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cps1Q8C196 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms