Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Gm27627-201ENSMUST00000183644 150 ntBASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.47□□□□□ -0.41
Nup54Q8BTS4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Gm4607-201ENSMUST00000206649 577 ntBASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Gm8385-201ENSMUST00000058999 643 ntBASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Gm22133-201ENSMUST00000102082 109 ntBASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Gm11511-201ENSMUST00000118146 540 ntBASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Gm24990-201ENSMUST00000157406 323 ntBASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.46□□□□□ -0.41
Nup54Q8BTS4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup54Q8BTS4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.42
Nup54Q8BTS4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup54Q8BTS4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Nup54Q8BTS4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup54Q8BTS4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup54Q8BTS4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup54Q8BTS4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup54Q8BTS4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup54Q8BTS4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nup54Q8BTS4 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.46□□□□□ -0.42
Nup54Q8BTS4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Gm11439-201ENSMUST00000118598 409 ntBASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Gm5419-201ENSMUST00000119301 527 ntBASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Gm5706-201ENSMUST00000181525 993 ntBASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Gm42599-201ENSMUST00000201308 469 ntBASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms