Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Snora78-201ENSMUST00000158630 128 ntBASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Gm24548-201ENSMUST00000158650 108 ntBASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Gm8738-201ENSMUST00000172606 329 ntBASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Gm6222-202ENSMUST00000182143 629 ntBASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc40Q8BI79 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Gm25261-201ENSMUST00000157416 134 ntBASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Gm27514-201ENSMUST00000183692 110 ntBASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Gm45925-201ENSMUST00000218882 744 ntBASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Gm22058-201ENSMUST00000083393 310 ntBASIC12.78□□□□□ -0.36
Ccdc40Q8BI79 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms