Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Gm11591-201ENSMUST00000120063 702 ntBASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Gm8018-201ENSMUST00000173536 789 ntBASIC11.8□□□□□ -0.52
Rnf38Q8BI21 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm11425-201ENSMUST00000119608 498 ntBASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm8738-201ENSMUST00000172606 329 ntBASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm27731-201ENSMUST00000185192 107 ntBASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm4034-201ENSMUST00000187674 480 ntBASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm45784-201ENSMUST00000188360 142 ntBASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.79□□□□□ -0.52
Rnf38Q8BI21 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm9396-201ENSMUST00000076703 567 ntBASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf38Q8BI21 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.78□□□□□ -0.52
Rnf38Q8BI21 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Gm13226-201ENSMUST00000117838 404 ntBASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Gm13492-201ENSMUST00000119772 665 ntBASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Gm14660-201ENSMUST00000119809 575 ntBASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Gm44405-201ENSMUST00000198952 126 ntBASIC11.78□□□□□ -0.52
Rnf38Q8BI21 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Gm39404-201ENSMUST00000216350 313 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms