Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gm42937-201ENSMUST00000197360 752 ntBASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.37□□□□□ -0.59
Pif1Q80SX8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.37□□□□□ -0.59
Pif1Q80SX8 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.37□□□□□ -0.59
Pif1Q80SX8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.36□□□□□ -0.59
Pif1Q80SX8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.36□□□□□ -0.59
Pif1Q80SX8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Gm12380-201ENSMUST00000119012 544 ntBASIC11.36□□□□□ -0.59
Pif1Q80SX8 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Gm9211-201ENSMUST00000182882 975 ntBASIC11.36□□□□□ -0.59
Pif1Q80SX8 Gm28064-201ENSMUST00000185639 858 ntBASIC11.36□□□□□ -0.59
Pif1Q80SX8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.36□□□□□ -0.59
Pif1Q80SX8 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.36□□□□□ -0.59
Pif1Q80SX8 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pif1Q80SX8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.35□□□□□ -0.59
Pif1Q80SX8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm15703-201ENSMUST00000120250 880 ntBASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms