Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Gm9996-201ENSMUST00000070359 913 ntBASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Gm44958-201ENSMUST00000203734 736 ntBASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh8Q7TSK3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms