Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Gm2231-201ENSMUST00000125661 612 ntBASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Gm26927-201ENSMUST00000182385 965 ntBASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Mir6420-201ENSMUST00000185032 102 ntBASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Ctdp1Q7TSG2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ctdp1Q7TSG2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Gm13369-201ENSMUST00000119442 987 ntBASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Gm11637-201ENSMUST00000120601 592 ntBASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.28□□□□□ -0.28
Ctdp1Q7TSG2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms