Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Gm22018-201ENSMUST00000104357 131 ntBASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Gm37008-201ENSMUST00000195712 319 ntBASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otub1Q7TQI3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Gm23931-201ENSMUST00000103842 109 ntBASIC11.59□□□□□ -0.55
Otub1Q7TQI3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Gm5370-201ENSMUST00000187187 574 ntBASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Gm43433-201ENSMUST00000196573 481 ntBASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Gm44405-201ENSMUST00000198952 126 ntBASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Snora73a-201ENSMUST00000082453 205 ntBASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otub1Q7TQI3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms