Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf139Q7TMV1 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Gm13296-201ENSMUST00000117854 997 ntBASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf139Q7TMV1 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13□□□□□ -0.33
Rnf139Q7TMV1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Gm12749-201ENSMUST00000122138 1159 ntBASIC13□□□□□ -0.33
Rnf139Q7TMV1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13□□□□□ -0.33
Rnf139Q7TMV1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Map1b-203ENSMUST00000223725 2669 ntBASIC13□□□□□ -0.33
Rnf139Q7TMV1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf139Q7TMV1 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf139Q7TMV1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf139Q7TMV1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.99□□□□□ -0.33
Rnf139Q7TMV1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf139Q7TMV1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf139Q7TMV1 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf139Q7TMV1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms