Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Mir1956-201ENSMUST00000157748 65 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm29499-201ENSMUST00000189151 486 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm28329-201ENSMUST00000191208 689 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm29171-201ENSMUST00000191397 486 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm19091-201ENSMUST00000208120 978 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm2875-201ENSMUST00000211333 360 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm26035-201ENSMUST00000083065 308 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Gm8731-201ENSMUST00000118088 412 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Gm10731-201ENSMUST00000181171 448 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Gm4654-201ENSMUST00000183305 982 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Gm6867-201ENSMUST00000219165 425 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Snrnp40Q6PE01 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Snrnp40Q6PE01 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Snrnp40Q6PE01 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Snrnp40Q6PE01 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Snrnp40Q6PE01 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Snrnp40Q6PE01 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Snrnp40Q6PE01 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Snrnp40Q6PE01 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms