Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Gm13315-201ENSMUST00000120376 991 ntBASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Gm4034-201ENSMUST00000187674 480 ntBASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Gm18187-201ENSMUST00000196476 984 ntBASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Gm5904-201ENSMUST00000210286 865 ntBASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smarcd3Q6P9Z1 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Gm12502-201ENSMUST00000120197 444 ntBASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Gm16177-201ENSMUST00000120728 718 ntBASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Gm1335-201ENSMUST00000121653 386 ntBASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Gm27682-201ENSMUST00000183930 110 ntBASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Gm18304-201ENSMUST00000189162 546 ntBASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Gm45930-201ENSMUST00000221330 292 ntBASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms