Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Gm7046-201ENSMUST00000221351 977 ntBASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Morn2-202ENSMUST00000227729 656 ntBASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sp140Q6NSQ5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Gm29396-201ENSMUST00000185659 716 ntBASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Olfr284-202ENSMUST00000206647 966 ntBASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sp140Q6NSQ5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms