Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Gm12241-201ENSMUST00000118330 726 ntBASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Gm12058-201ENSMUST00000118614 437 ntBASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Gm2991-201ENSMUST00000173338 480 ntBASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Gm43179-201ENSMUST00000198797 275 ntBASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 CT009738.1-201ENSMUST00000219031 809 ntBASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Gm9368-201ENSMUST00000219348 831 ntBASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ParpbpQ6IRT3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Gm12314-201ENSMUST00000118104 538 ntBASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Gm9083-201ENSMUST00000120423 819 ntBASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Gm25043-201ENSMUST00000158604 212 ntBASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Gm9630-201ENSMUST00000178304 885 ntBASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Gm3961-201ENSMUST00000204425 994 ntBASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Olfr582-201ENSMUST00000098212 960 ntBASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms