Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VcanQ62059 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VcanQ62059 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
VcanQ62059 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
VcanQ62059 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VcanQ62059 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VcanQ62059 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.13□□□□□ -0.63
VcanQ62059 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.13□□□□□ -0.63
VcanQ62059 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.13□□□□□ -0.63
VcanQ62059 Gm5705-201ENSMUST00000066241 711 ntBASIC11.13□□□□□ -0.63
VcanQ62059 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VcanQ62059 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
VcanQ62059 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.12□□□□□ -0.63
VcanQ62059 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.12□□□□□ -0.63
VcanQ62059 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.12□□□□□ -0.63
VcanQ62059 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
VcanQ62059 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
VcanQ62059 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
VcanQ62059 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.12□□□□□ -0.63
VcanQ62059 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.12□□□□□ -0.63
VcanQ62059 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
VcanQ62059 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.12□□□□□ -0.63
VcanQ62059 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC11.12□□□□□ -0.63
VcanQ62059 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
VcanQ62059 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
VcanQ62059 Gm7150-201ENSMUST00000122032 981 ntBASIC11.12□□□□□ -0.63
VcanQ62059 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.12□□□□□ -0.63
VcanQ62059 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.12□□□□□ -0.63
VcanQ62059 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.12□□□□□ -0.63
VcanQ62059 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
VcanQ62059 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Map1b-203ENSMUST00000223725 2669 ntBASIC11.12□□□□□ -0.63
VcanQ62059 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
VcanQ62059 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
VcanQ62059 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.11□□□□□ -0.63
VcanQ62059 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.11□□□□□ -0.63
VcanQ62059 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.11□□□□□ -0.63
VcanQ62059 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC11.11□□□□□ -0.63
VcanQ62059 Gm26782-203ENSMUST00000227103 751 ntBASIC11.11□□□□□ -0.63
VcanQ62059 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.11□□□□□ -0.63
VcanQ62059 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.11□□□□□ -0.63
VcanQ62059 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.11□□□□□ -0.63
VcanQ62059 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Gm23745-201ENSMUST00000104230 125 ntBASIC11.11□□□□□ -0.63
VcanQ62059 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
VcanQ62059 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.11□□□□□ -0.63
VcanQ62059 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Mir7221-201ENSMUST00000184009 72 ntBASIC11.11□□□□□ -0.63
VcanQ62059 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.11□□□□□ -0.63
VcanQ62059 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.11□□□□□ -0.63
VcanQ62059 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.11□□□□□ -0.63
VcanQ62059 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.11□□□□□ -0.63
VcanQ62059 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC11.11□□□□□ -0.63
VcanQ62059 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Gm9791-201ENSMUST00000060997 447 ntBASIC11.11□□□□□ -0.63
VcanQ62059 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VcanQ62059 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.1□□□□□ -0.63
VcanQ62059 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
VcanQ62059 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.1□□□□□ -0.63
VcanQ62059 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.1□□□□□ -0.63
VcanQ62059 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms