Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm19208-201ENSMUST00000213861 912 ntBASIC12.69□□□□□ -0.38
Smarcd1Q61466 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.69□□□□□ -0.38
Smarcd1Q61466 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Smarcd1Q61466 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.69□□□□□ -0.38
Smarcd1Q61466 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.69□□□□□ -0.38
Smarcd1Q61466 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.68□□□□□ -0.38
Smarcd1Q61466 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Gm12217-201ENSMUST00000118858 696 ntBASIC12.68□□□□□ -0.38
Smarcd1Q61466 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.68□□□□□ -0.38
Smarcd1Q61466 Gm5419-201ENSMUST00000119301 527 ntBASIC12.68□□□□□ -0.38
Smarcd1Q61466 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Mir6927-201ENSMUST00000184494 71 ntBASIC12.68□□□□□ -0.38
Smarcd1Q61466 Gm18038-201ENSMUST00000197900 485 ntBASIC12.68□□□□□ -0.38
Smarcd1Q61466 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.68□□□□□ -0.38
Smarcd1Q61466 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd1Q61466 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.67□□□□□ -0.38
Smarcd1Q61466 Gm4909-201ENSMUST00000118749 794 ntBASIC12.67□□□□□ -0.38
Smarcd1Q61466 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Gm12266-201ENSMUST00000120311 962 ntBASIC12.67□□□□□ -0.38
Smarcd1Q61466 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Gm17040-202ENSMUST00000170597 889 ntBASIC12.67□□□□□ -0.38
Smarcd1Q61466 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.67□□□□□ -0.38
Smarcd1Q61466 Gm8956-201ENSMUST00000203939 825 ntBASIC12.67□□□□□ -0.38
Smarcd1Q61466 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.67□□□□□ -0.38
Smarcd1Q61466 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Smarcd1Q61466 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.67□□□□□ -0.38
Smarcd1Q61466 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.67□□□□□ -0.38
Smarcd1Q61466 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms