Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm11509-201ENSMUST00000117358 325 ntBASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm5705-201ENSMUST00000066241 711 ntBASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm42518-201ENSMUST00000196277 938 ntBASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Mt1-202ENSMUST00000211807 1085 ntBASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc88aQ5SNZ0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc88aQ5SNZ0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc88aQ5SNZ0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm15595-201ENSMUST00000120840 961 ntBASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm18711-201ENSMUST00000199341 750 ntBASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm5733-201ENSMUST00000190232 939 ntBASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc88aQ5SNZ0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms